BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003D12LP1|AL425124
(914 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1708 1771 0.0
>3x_Contig1708
Length = 19451
Score = 1771 bits (892), Expect = 0.0
Identities = 909/915 (99%), Gaps = 1/915 (0%)
Strand = Plus / Plus
Query: 1 atccataggccagaaccttaggaagttgtcgctcaatagatgcactggcttgactgatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18345 atccataggccagaaccttaggaagttgtcgctcaatagatgcactggcttgactgatag 18404
Query: 61 ctgtataattaatggatttttaccatttttgtctaactcagggcaatcaatccttacaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18405 ctgtataattaatggatttttaccatttttgtctaactcagggcaatcaatccttacaga 18464
Query: 121 cttggaattagaagaattggatcagataaccaccgacggcatagttctattattctcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18465 cttggaattagaagaattggatcagataaccaccgacggcatagttctattattctcttc 18524
Query: 181 gttgcagtnccctttgttgaaaagatgtagcttgaaaagatgttttgctttggaggatgc 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18525 gttgcagttccctttgttgaaaagatgtagcttgaaaagatgttttgctttggaggatgc 18584
Query: 241 agccgtagttgaattattacttaactcctcttccaccttagaagagttgaatctaaatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18585 agccgtagttgaattattacttaactcctcttccaccttagaagagttgaatctaaatgg 18644
Query: 301 tctgaaatccctaacatccaaaactttcaccttcatggcatgtcctaacctcaagcagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18645 tctgaaatccctaacatccaaaactttcaccttcatggcatgtcctaacctcaagcagct 18704
Query: 361 aaatatagggtttgtccactgtgtg-ataatgaaattgtggaaaagatatccaaggacaa 419
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 18705 aaatatagggtttgtccactgtgtggataatgaaattgtggaaaagatatccaaggacaa 18764
Query: 420 tgaaaagctcactattattgaagtttatggtgataatcaagtcacaggcaaatgctctcc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18765 tgaaaagctcactattattgaagtttatggtgataatcaagtcacaggcaaatgctctcc 18824
Query: 480 tcggaatggtgtaagcattatcggaaggcaaagtgacagtatataaatgattaaaaaaat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18825 tcggaatggtgtaagcattatcggaaggcaaagtgacagtatataaatgattaaaaaaat 18884
Query: 540 tctaggatcatgaaaatgcttgagtgtgagaatgccctttcagctactactttaaataat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18885 tctaggatcatgaaaatgcttgagtgtgagaatgccctttcagctactactttaaataat 18944
Query: 600 ctatagacatgtaatcatcaaatttaggtttctgatggatcttttctaaatttctaaaag 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18945 ctatagacatgtaatcatcaaatttaggtttctgatggatcttttctaaatttctaaaag 19004
Query: 660 taggcaaaggtgctggattgagctgcttcgatgcaagcgtctcttttatagtatttttaa 719
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 19005 taggcaaaggtgctggattgagctgcttcgatgcaagcgtctctattatagtatttttaa 19064
Query: 720 tttgaggcttatcaatgaacaatccaggatgaccgttcgatctatacttttctgatttat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19065 tttgaggcttatcaatgaacaatccaggatgaccgttcgatctatacttttctgatttat 19124
Query: 780 accagtccttggttagcttggcgttcggcctccatgttgggttgttgattttgaacctat 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19125 accagtccttggttagcttggcgttcggcctccatgttgggttgttgattttgaacctat 19184
Query: 840 tgtgaactattkggtcaaacccaaaacgggatttcgataaattggtttcgtactcggaat 899
||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 19185 tgtgaactattgggtcaaacccaaaacgggattgcgataaattggtttcgtactcggaat 19244
Query: 900 aatctgcattkatta 914
|||||||||| ||||
Sbjct: 19245 aatctgcattgatta 19259
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6990
Number of Sequences: 1807
Number of extensions: 6990
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)